multiple sequence alignment

Although gap penalties affect the results of multiple sequence alignment, it is not clear whether there is difference among results got when using different gap coding method and tree search method.

虽然空位罚分显著地影响多序列比对，但是并不清楚当空位以不同的方法编码和使用不同的重建算法时系统发育分析结果是否存在差异。

LSS-DCA: A Fast Multiple Sequence Alignment with Divide-and-conquer Algorithm

LSS-DCA：一个快速的分治多序列对齐算法

pairwise sequence alignment is one of common methods in analyzing sequence, which also is the base of multiple sequence alignment and data search.

双序列比对是序列分析常用的方法之一，也是多序列比对和数据库搜索的基础。

A New Iteratively Progressive Multiple Sequence Alignment Algorithm

一种新的迭代渐进多序列比对算法

Algorithm Based on Iteratively Progressive Multiple Sequence Alignment

基于迭代渐进多序列比对算法研究

To study multiple sequence alignment and profile HMMs, one essential algorithm of HMMs and how to build an HMMs are discussed.

探讨了多重序列比对和序列谱隐马尔可夫模型，讨论了隐马尔可夫模型的基本算法以及如何建立HMMs。